KAT is a suite of tools that analyse jellyfish hashes or sequence files (fasta or fastq) using kmer counts. The following tools are currently available in KAT: kmer: Produces a k-mer hash containing ...

This repository aims at being a base for new Java repositories used in PDS. It guides developers to ease the initialization of a project and recommends preferred options to standardize developments ...

Abstract: Java offers the Java Native Interface (JNI), which allows programs running in the Java Virtual Machine to invoke and be manipulated by native applications and libraries written in other ...

Amplicon sequencing provides a suitable approach for microbiome profiling, supported by a variety of R-based and web-based tools. In this review, we systematically evaluated eight freely accessible ...

Strengthen your agency’s edge by using AI code detection to spot risky AI-generated sections early and protect quality, security, and client trust. Build a repeatable review process by scanning repos, ...

Abstract: Modern software relies on a multitude of automated testing and quality assurance tools to prevent errors, bugs and potential vulnerabilities. This study sets out to provide a head-to-head, ...